Choosing Between NIR and Wet Chemistry : A Lab Manager's Guide
- Blue Sun Scientific
- Jul 21
- 4 min read

Choosing the right analytical technology is one of the mostre critical strategic decisions a laboratory or plant manager can make. The choice between investing in a Near-Infrared (NIR) spectroscopy system and expanding traditional wet chemistry capabilities has significant, long-term implications for a lab's workflow, operational costs, and overall efficiency. Understanding their core differences is key to deciding which path is best for your operations.
The Impact of Workflow on Daily Operations
The most immediate difference between the two technologies is seen in the day-to-day workflow, which can impact labor, sample throughput, and safety.
A traditional wet chemistry workflow is a multi-stage, hands-on process that demands significant technician time and skill.
A single protein analysis using the Kjeldahl method, for instance, involves a multi-hour digestion step with concentrated sulfuric acid at high temperatures, followed by distillation and manual titration. This process is inherently destructive, consuming the sample and generating hazardous chemical waste that requires costly disposal. It necessitates highly trained chemists comfortable with complex procedures and hazardous materials.
In contrast, the modern NIR workflow is defined by its simplicity and speed. Sample preparation is often minimal; solids can often be poured directly into a reusable sample cup. The analysis is a "push-button" operation that typically takes less than 60 seconds. This allows the instrument to be effectively operated by non-specialist staff with minimal training, freeing up skilled chemists for more complex routines.
The Economic Calculus: A Cost-Benefit Analysis
For any manager, the financial implications of an investment can be a deciding factor. NIR and wet chemistry have fundamentally different cost structures, from the initial purchase to ongoing operational expenses.
CAPEX: In terms of capital expenditure, the primary cost for an NIR system is the spectrometer itself, with a standard benchtop system typically costing around $60,000. While it might seem cheaper if some equipment already exists, establishing a new, fully functional wet chemistry lab can be a massive capital undertaking. This includes multiple pieces of equipment like digestion and distillation units, as well as critical infrastructure such as specialized chemical fume hoods, which can cost over $10,000 for the unit alone and may require expensive modifications to a building's HVAC system.
OPEX: Operational expenditure is where NIR provides a decisive and ongoing financial advantage. NIR systems have exceptionally low ongoing costs, with virtually no recurring consumables since samples are measured in reusable cups. The non-destructive method generates no chemical waste, eliminating disposal costs.
Conversely, wet chemistry labs face continuous and significant operational costs, including the constant purchase of chemical reagents, high costs for regulated hazardous waste disposal, and the dedicated time of skilled technicians. This difference is reflected in commercial lab pricing, where a full NIR analysis package typically costs between $15 and $25, while a comparable wet chemistry analysis can run from $30 to $55 or more.
Performance and Capabilities: The Right Tool for the Job

Your analytical goals should ultimately dictate your technology choice. It is critical to understand the difference between accuracy and precision. Wet chemistry is the primary reference method and is considered the benchmark for accuracy, which is the closeness to a true value.
An NIR model's accuracy is limited by the reference data used to create it. However, NIR is often more precise (repeatable) than wet chemistry. Its automated process eliminates most sources of human error, making it ideal for process control where detecting small deviations is critical.
Empirical Performance: NIR Calibration Metrics vs. Wet Chemistry References
To illustrate NIR's performance when calibrated against wet chemistry data, consider the following table of validation metrics for common forage constituents. These results, derived from wet chemistry as the ground truth, show NIR achieving strong correlations (RSQ often >0.9) and low errors for most parameters, making it reliable for routine use after proper calibration.

RSQ (R-squared) is the coefficient of determination, measuring how well the NIR model explains the variance in the wet chemistry reference data. Higher values (closer to 1) indicate a stronger correlation and better model fit.
SECV (Standard Error of Cross-Validation) quantifies the average error in NIR predictions during cross-validation against wet chemistry values. Lower values signify greater predictive accuracy and reliability.
For instance, high-RSQs like 0.98 for CP (crude protein) demonstrate NIR's near-equivalent accuracy to wet chemistry for key nutrients, with minimal SECV. Lower values, such as for dNDF30 (0.61 RSQ), highlight areas where wet chemistry remains superior for precision. Overall, this data underscores NIR's effectiveness for many analytes while emphasizing the need for wet chemistry in model development and validation.
Neither method can do everything. NIR is best suited for measuring major organic components like protein, fat, and fiber at concentrations above 0.1%. It is not reliable for truly novel or unknown samples, as its models are only dependable for samples similar to the calibration data.
Wet chemistry is required for trace element and mineral analysis and is the only reliable option for highly variable or unknown samples. It is also necessary for final product certification where official regulatory methods must be used.
The Final Decision: A Strategy of Intelligent Integration
The decision to invest is not about replacement, but about intelligent integration. The greatest value from an NIR system often comes from its use as a Process Analytical Technology (PAT). The ability to get results in near-real-time allows operators to make immediate process adjustments, which can prevent out-of-spec batches, reduce product variability, and accelerate the release of finished goods.
Invest in NIR if your primary goals involve high-volume routine analysis, frequent quality checks, or in-process monitoring.
The ROI from savings on labor, consumables, and waste, combined with process efficiencies, is rapid and substantial. At the same time, you should retain wet chemistry capabilities, either in-house or through a partner lab, for the essential functions that NIR cannot perform.
This includes regulatory certification, trace mineral analysis, and the analysis of novel samples. This foundational capability is also essential for building and validating your initial NIR calibration models.
By adopting this symbiotic strategy, you leverage the powerful efficiency and precision of NIR for the bulk of your analytical workload while keeping the foundational accuracy of wet chemistry for the critical tasks that require it.
For a more indepth comparison of NIR vs Wet Chemistry, watch Rebecca Kern's talk from INFA 2023: NIRS vs Wet Chemistry for Evaluation of Forage Quality